Main Figures
Before running any other file, run “scripts/main.R”. It will load the necessary packages, functions, and compile the Stan model.
Figure 1
Mostly made in Inkscape but Figure 1e can be made by running “scripts/figures/main_text/short_vs_long_ts.R”
Figure 2
Made entirely in Inkscape
Figure 3
Run “scripts/figures/main_text/fig3_code.R”
The final figure used in the publication was edited in Inkscape. The code to create the heatmaps (Fig. 3f,l) was run on the computing cluster Puhti and is therefore not included here.
Figure 4
Run “scripts/figures/main_text/fig4_code.R”
The final figure used in the publication was edited in Inkscape
Figure 5
Run “scripts/figures/main_text/fig5_code.R”
The final figure used in the publication was edited in Inkscape